How to measure diagnosis-associated information in virtual slides

نویسندگان

  • Klaus Kayser
  • Jürgen Görtler
  • Stephan Borkenfeld
  • Gian Kayser
چکیده

The distribution of diagnosis-associated information in histological slides is often spatial dependent. A reliable selection of the slide areas containing the most significant information to deriving the associated diagnosis is a major task in virtual microscopy. Three different algorithms can be used to select the appropriate fields of view: 1) Object dependent segmentation combined with graph theory; 2) time series associated texture analysis; and 3) geometrical statistics based upon geometrical primitives. These methods can be applied by sliding technique (i.e., field of view selection with fixed frames), and by cluster analysis. The implementation of these methods requires a standardization of images in terms of vignette correction and gray value distribution as well as determination of appropriate magnification (method 1 only). A principle component analysis of the color space can significantly reduce the necessary computation time. Method 3 is based upon gray value dependent segmentation followed by graph theory application using the construction of (associated) minimum spanning tree and Voronoi's neighbourhood condition. The three methods have been applied on large sets of histological images comprising different organs (colon, lung, pleura, stomach, thyroid) and different magnifications, The trials resulted in a reproducible and correct selection of fields of view in all three methods. The different algorithms can be combined to a basic technique of field of view selection, and a general theory of "image information" can be derived. The advantages and constraints of the applied methods will be discussed.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

How to measure image quality in tissue-based diagnosis (diagnostic surgical pathology)

BACKGROUND Automated image analysis, measurements of virtual slides, and open access electronic measurement user systems require standardized image quality assessment in tissue-based diagnosis. AIMS To describe the theoretical background and the practical experiences in automated image quality estimation of colour images acquired from histological slides. THEORY, MATERIAL AND MEASUREMENTS: Di...

متن کامل

Tracking with virtual slides: a tool to study diagnostic error in histopathology.

AIMS To determine the reasons for diagnostic error by virtual slides which allow unsupervised study of diagnosis and error. METHODS AND RESULTS Software was developed to produce visualizations of the diagnostic track followed by pathologists as they viewed virtual slides. These showed the diagnostic path in four dimensions (x, y, time and zoom), areas studied for >1000 ms, and included pathol...

متن کامل

Multi-Layer Virtual Slide Scanning System with Multi-Focus Image Fusion for Cytopathology and Image Diagnosis

Objective: The virtual slides are high-magnification whole digital images of histopathological tissue sections. The existing virtual slide system, which is optimized for scanning flat and smooth plane slides such as histopathological paraffin-embedded tissue sections, but is unsuitable for scanning irregular plane slides such as cytological smear slides. This study aims to develop a virtual sli...

متن کامل

Development of a teledermatopathology consultation system using virtual slides

BACKGROUND An online consultation system using virtual slides (whole slide images; WSI) has been developed for pathological diagnosis, and could help compensate for the shortage of pathologists, especially in the field of dermatopathology and in other fields dealing with difficult cases. This study focused on the performance and future potential of the system. METHOD In our system, histologic...

متن کامل

Virtual reality Powerwall versus conventional microscope for viewing pathology slides: an experimental comparison.

AIMS Virtual slides could replace the conventional microscope. However, it can take 60% longer to make a diagnosis with a virtual slide, due to the small display size and inadequate user interface of current systems. The aim was to create and test a virtual reality (VR) microscope using a Powerwall (a high-resolution array of 28 computer screens) for viewing virtual slides more efficiently. M...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:

دوره 6  شماره 

صفحات  -

تاریخ انتشار 2011